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InterMine Has input format

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  • Chado
  • Ensembl
  • GO gene association files
  • GO ontology files
  • InParanoid orthologs
  • PSI XML (protein interactions)
  • UniProt XML
  • Uniprot
  • [[FASTA]]
  • [[GFF3]]
  • and many others. Custom formats can be supported through the data-source framework.

 

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