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January 2007 GMOD Meeting
From GMOD
GMOD Generic Model Organism Database
Meeting 9
January 18-19, San Diego CA.
The January 2007 GMOD meeting was held at the Town and Country Hotel in San Diego. The meeting was divided into two parts: a MOD user interface caucus and a Chado Middleware Bake Off.
MOD User Interface Caucus
Report from the UI Caucus: MOD Interface Summary
GMOD Middleware
Reports from the Middleware Meeting: GMOD Middleware
Agenda
- 9:00 AM - 9:05 AM Introduction, Eric Just
- 9:05 AM - 9:30 AM Object/relational Mapping Principles, Sohel Merchant
- 9:30 AM - 9:55 AM XORT, Pinglei Zhou
- 9:55 AM - 10:20 AM Chado::AutoDBI, Brian O'Connor
- 10:20 AM - 10:35 AM Coffee Break
- 10:35 AM - 11:00 AM Modware, Eric Just
- 11:00 AM - 11:20 AM GBrowse (DasI) Adaptor, Scott Cain
- 11:20 AM - 11:45 AM iBatis, Jeff Bowes
- 11:45 AM - 1:15 PM LUNCH
- 1:15 PM - 1:40 PM Hibernate, Robert Bruggner
- 1:40 PM - 2:05 PM PSU Chado Interface, Chinmay Patel
- 2:05 PM - 2:20 PM Coffee Break
- 2:20 PM - 2:45 PM GUS Web Development Kit (not GUS-specific), Steve Fischer
- 2:45 PM - 3:10 PM InterMine/FlyMine data warehousing, Gos Micklem
- 3:10 PM - 4:30 PM Wrap up (Eric Just, Scott Cain, Brian Osborne), discussion
Attendees
The meeting was well attended, with about 60 people from a large variety of organizations:
Peter Karp | EcoCyc |
Richard Bruskiewich | IRRI/IRIS + Generation Challenge Programme |
Kate Rosenbloom | UCSC Genome Bioinformatics Group |
Zhiliang Hu | Iowa State University |
Robert Wilson | FlyBase |
Sohel Merchant | DictyBase |
Chinmay Patel | GeneDB |
pinglei zhou | FlyBase |
Prachi Shah | Candida Genome Database |
Vivien Bonazzi | NHGRI |
Jay Sundaram | TIGR |
Peter Karp | EcoCyc |
Ben Faga | GMOD |
George Kowalski | RGD |
Dave Matthews | GrainGenes |
Brian Osborne | NESCent |
Eric Just | DictyBase |
Susan Bromberg | RGD |
Eva Huala | TAIR |
Allen | GMOD |
Sheldon McKay | WormBase |
Todd Harris | WormBase |
Kim Pruitt | NCBI |
Karla Gendler | ChromDB (www.chromdb.org) |
Donghui Li | TAIR |
Gos Micklem | FlyMine/InterMine |
Ning Wei | TAMU |
Brian Osborne | NESCent |
Sofia Robb | PlanariaDB |
steve fischer | GUS/PlasmoDB |
Brian O'Connor | UCLA |
Arek Kasprzyk | EBI |
Robert Bruggner | VectorBase |
Susan Bridges | AgBase |
Lincoln Stein | WormBase |
Madeline A. Crosby | FlyBase |
Robert Buels | SGN |
Dianna Fisk | SGD |
Sohel Merchant | DictyBase |
Bob Muller | TAIR |
Suzanne Paley | EcoCyc |
Hanni Salih | BovineGenome.org |
Peili Zhang | FlyBase |
Eric Ross | PlanariaDB |
Manuel J Torres | Plant Genome Mapping Lab, UGA |
James Reecy | Animalgenome.org |
Eileen Kraemer | ApiDB |
Brian O'Connor | UCLA |
Jim Hu | EcoliHub/EcoliWiki |
Justin Reese | BeeBase, Bovine Genome Database |
Victor Strelets | FlyBase |
Josh Goodman | FlyBase |
Christine Elsik | BeeBase, Bovine Genome Database |
Anand Venkatraman | BeeBase |
Haiyan Zhang | FlyBase |
Don Gilbert | wFleaBase, DroSpeGe |
David Adelson | bovinegenome.org |
Ceri Van Slyke | ZFIN |
Joshua Orvis | TIGR |
Kathleen Falls | FlyBase |
Jeff Bowes | XenBase |
Susan Bello | MGI |
Joel Richardson | MGI |
Scott Cain | GMOD |